Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Trav6-6A0A075B603 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-6A0A075B603 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-6A0A075B603 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-6A0A075B603 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-6A0A075B603 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav6-6A0A075B603 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.53■□□□□ 0.24
Trav6-6A0A075B603 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav6-6A0A075B603 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-6A0A075B603 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-6A0A075B603 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav6-6A0A075B603 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-6A0A075B603 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Trav6-6A0A075B603 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav6-6A0A075B603 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-6A0A075B603 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Trav6-6A0A075B603 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-6A0A075B603 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trav6-6A0A075B603 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trav6-6A0A075B603 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-6A0A075B603 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav6-6A0A075B603 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-6A0A075B603 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-6A0A075B603 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-6A0A075B603 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav6-6A0A075B603 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-6A0A075B603 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-6A0A075B603 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-6A0A075B603 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-6A0A075B603 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-6A0A075B603 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-6A0A075B603 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-6A0A075B603 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-6A0A075B603 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-6A0A075B603 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-6A0A075B603 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Trav6-6A0A075B603 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav6-6A0A075B603 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Nkain2-201ENSMUST00000092602 558 ntBASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-6A0A075B603 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-6A0A075B603 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-6A0A075B603 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-6A0A075B603 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-6A0A075B603 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-6A0A075B603 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav6-6A0A075B603 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-6A0A075B603 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-6A0A075B603 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav6-6A0A075B603 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trav6-6A0A075B603 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-6A0A075B603 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-6A0A075B603 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-6A0A075B603 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-6A0A075B603 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-6A0A075B603 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.46■□□□□ 0.22
Trav6-6A0A075B603 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-6A0A075B603 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-6A0A075B603 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-6A0A075B603 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-6A0A075B603 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-6A0A075B603 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-6A0A075B603 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav6-6A0A075B603 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-6A0A075B603 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav6-6A0A075B603 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav6-6A0A075B603 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-6A0A075B603 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-6A0A075B603 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-6A0A075B603 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trav6-6A0A075B603 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav6-6A0A075B603 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-6A0A075B603 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-6A0A075B603 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-6A0A075B603 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-6A0A075B603 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-6A0A075B603 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav6-6A0A075B603 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav6-6A0A075B603 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-6A0A075B603 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-6A0A075B603 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-6A0A075B603 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav6-6A0A075B603 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-6A0A075B603 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-6A0A075B603 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.41■□□□□ 0.22
Trav6-6A0A075B603 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms