Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Trav9-1A0A075B601 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9-1A0A075B601 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9-1A0A075B601 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9-1A0A075B601 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9-1A0A075B601 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.34■□□□□ 0.37
Trav9-1A0A075B601 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9-1A0A075B601 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9-1A0A075B601 Gm4799-201ENSMUST00000095396 657 ntBASIC17.34■□□□□ 0.37
Trav9-1A0A075B601 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav9-1A0A075B601 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.33■□□□□ 0.37
Trav9-1A0A075B601 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trav9-1A0A075B601 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav9-1A0A075B601 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trav9-1A0A075B601 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trav9-1A0A075B601 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9-1A0A075B601 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9-1A0A075B601 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9-1A0A075B601 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav9-1A0A075B601 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9-1A0A075B601 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9-1A0A075B601 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9-1A0A075B601 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9-1A0A075B601 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9-1A0A075B601 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav9-1A0A075B601 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav9-1A0A075B601 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9-1A0A075B601 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9-1A0A075B601 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9-1A0A075B601 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.29■□□□□ 0.36
Trav9-1A0A075B601 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9-1A0A075B601 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav9-1A0A075B601 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.29■□□□□ 0.36
Trav9-1A0A075B601 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9-1A0A075B601 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9-1A0A075B601 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav9-1A0A075B601 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9-1A0A075B601 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav9-1A0A075B601 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav9-1A0A075B601 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav9-1A0A075B601 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.28■□□□□ 0.36
Trav9-1A0A075B601 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav9-1A0A075B601 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav9-1A0A075B601 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9-1A0A075B601 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9-1A0A075B601 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav9-1A0A075B601 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9-1A0A075B601 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9-1A0A075B601 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trav9-1A0A075B601 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav9-1A0A075B601 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trav9-1A0A075B601 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav9-1A0A075B601 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9-1A0A075B601 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9-1A0A075B601 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.26■□□□□ 0.35
Trav9-1A0A075B601 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9-1A0A075B601 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9-1A0A075B601 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav9-1A0A075B601 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9-1A0A075B601 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9-1A0A075B601 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav9-1A0A075B601 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.25■□□□□ 0.35
Trav9-1A0A075B601 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.25■□□□□ 0.35
Trav9-1A0A075B601 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.25■□□□□ 0.35
Trav9-1A0A075B601 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9-1A0A075B601 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Trav9-1A0A075B601 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav9-1A0A075B601 Gm7432-201ENSMUST00000210343 879 ntBASIC17.24■□□□□ 0.35
Trav9-1A0A075B601 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trav9-1A0A075B601 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9-1A0A075B601 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Trav9-1A0A075B601 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav9-1A0A075B601 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav9-1A0A075B601 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav9-1A0A075B601 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav9-1A0A075B601 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9-1A0A075B601 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9-1A0A075B601 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9-1A0A075B601 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav9-1A0A075B601 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9-1A0A075B601 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9-1A0A075B601 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9-1A0A075B601 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9-1A0A075B601 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9-1A0A075B601 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9-1A0A075B601 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9-1A0A075B601 Mir3960-201ENSMUST00000198213 73 ntBASIC17.22■□□□□ 0.35
Trav9-1A0A075B601 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9-1A0A075B601 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9-1A0A075B601 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9-1A0A075B601 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9-1A0A075B601 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav9-1A0A075B601 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav9-1A0A075B601 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9-1A0A075B601 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9-1A0A075B601 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9-1A0A075B601 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav9-1A0A075B601 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav9-1A0A075B601 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms