Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.24■□□□□ 0.67
Trav5-1A0A075B5Z7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav5-1A0A075B5Z7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav5-1A0A075B5Z7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav5-1A0A075B5Z7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.24■□□□□ 0.67
Trav5-1A0A075B5Z7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav5-1A0A075B5Z7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav5-1A0A075B5Z7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav5-1A0A075B5Z7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav5-1A0A075B5Z7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav5-1A0A075B5Z7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav5-1A0A075B5Z7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav5-1A0A075B5Z7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav5-1A0A075B5Z7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trav5-1A0A075B5Z7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav5-1A0A075B5Z7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav5-1A0A075B5Z7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Trav5-1A0A075B5Z7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav5-1A0A075B5Z7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav5-1A0A075B5Z7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.22■□□□□ 0.67
Trav5-1A0A075B5Z7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav5-1A0A075B5Z7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav5-1A0A075B5Z7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.21■□□□□ 0.67
Trav5-1A0A075B5Z7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trav5-1A0A075B5Z7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trav5-1A0A075B5Z7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.2■□□□□ 0.66
Trav5-1A0A075B5Z7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trav5-1A0A075B5Z7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav5-1A0A075B5Z7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav5-1A0A075B5Z7 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.2■□□□□ 0.66
Trav5-1A0A075B5Z7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trav5-1A0A075B5Z7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav5-1A0A075B5Z7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav5-1A0A075B5Z7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav5-1A0A075B5Z7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav5-1A0A075B5Z7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav5-1A0A075B5Z7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav5-1A0A075B5Z7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav5-1A0A075B5Z7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav5-1A0A075B5Z7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav5-1A0A075B5Z7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav5-1A0A075B5Z7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav5-1A0A075B5Z7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trav5-1A0A075B5Z7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trav5-1A0A075B5Z7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5-1A0A075B5Z7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav5-1A0A075B5Z7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav5-1A0A075B5Z7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav5-1A0A075B5Z7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav5-1A0A075B5Z7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav5-1A0A075B5Z7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Trav5-1A0A075B5Z7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav5-1A0A075B5Z7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav5-1A0A075B5Z7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trav5-1A0A075B5Z7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav5-1A0A075B5Z7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trav5-1A0A075B5Z7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav5-1A0A075B5Z7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.13■□□□□ 0.65
Trav5-1A0A075B5Z7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav5-1A0A075B5Z7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav5-1A0A075B5Z7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav5-1A0A075B5Z7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav5-1A0A075B5Z7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav5-1A0A075B5Z7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav5-1A0A075B5Z7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav5-1A0A075B5Z7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.12■□□□□ 0.65
Trav5-1A0A075B5Z7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5-1A0A075B5Z7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5-1A0A075B5Z7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5-1A0A075B5Z7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5-1A0A075B5Z7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.12■□□□□ 0.65
Trav5-1A0A075B5Z7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5-1A0A075B5Z7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav5-1A0A075B5Z7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav5-1A0A075B5Z7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav5-1A0A075B5Z7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav5-1A0A075B5Z7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav5-1A0A075B5Z7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav5-1A0A075B5Z7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav5-1A0A075B5Z7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.1■□□□□ 0.65
Trav5-1A0A075B5Z7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav5-1A0A075B5Z7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.09■□□□□ 0.65
Trav5-1A0A075B5Z7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav5-1A0A075B5Z7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav5-1A0A075B5Z7 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.09■□□□□ 0.65
Trav5-1A0A075B5Z7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav5-1A0A075B5Z7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav5-1A0A075B5Z7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav5-1A0A075B5Z7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav5-1A0A075B5Z7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms