Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm2810-201ENSMUST00000118681 990 ntBASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h3Q9Z0Y9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm9824-201ENSMUST00000178707 561 ntBASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h3Q9Z0Y9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Nr1h3Q9Z0Y9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nr1h3Q9Z0Y9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nr1h3Q9Z0Y9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms