Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Gm24543-201ENSMUST00000103867 82 ntBASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Gm10576-201ENSMUST00000191927 825 ntBASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Gm8749-201ENSMUST00000117737 331 ntBASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn8aQ9WTU3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Gm27533-201ENSMUST00000183800 152 ntBASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn8aQ9WTU3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Gm6222-201ENSMUST00000120787 396 ntBASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn8aQ9WTU3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.86□□□□□ -0.03
Scn8aQ9WTU3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn8aQ9WTU3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn8aQ9WTU3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn8aQ9WTU3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn8aQ9WTU3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn8aQ9WTU3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn8aQ9WTU3 Gm17837-201ENSMUST00000186435 985 ntBASIC14.86□□□□□ -0.03
Scn8aQ9WTU3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms