Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3aQ9JKX8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Gm6973-201ENSMUST00000117080 721 ntBASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3aQ9JKX8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Olfr286-202ENSMUST00000205305 969 ntBASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms