Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpxQ9JHS4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Gm27867-201ENSMUST00000184778 125 ntBASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Birc2-201ENSMUST00000054878 378 ntBASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpxQ9JHS4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClpxQ9JHS4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms