Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb4Q91XZ6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Gm24589-201ENSMUST00000116692 94 ntBASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb4Q91XZ6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Gm25990-201ENSMUST00000102440 86 ntBASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Gm6376-201ENSMUST00000209407 580 ntBASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb4Q91XZ6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Gm10819-201ENSMUST00000099988 561 ntBASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb4Q91XZ6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms