Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.4■□□□□ 0.06
Trim60Q8VI40 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.4■□□□□ 0.06
Trim60Q8VI40 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Gm23547-201ENSMUST00000158210 271 ntBASIC15.4■□□□□ 0.06
Trim60Q8VI40 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.4■□□□□ 0.06
Trim60Q8VI40 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim60Q8VI40 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.4■□□□□ 0.06
Trim60Q8VI40 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.4■□□□□ 0.06
Trim60Q8VI40 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.4■□□□□ 0.06
Trim60Q8VI40 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.39■□□□□ 0.05
Trim60Q8VI40 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.39■□□□□ 0.05
Trim60Q8VI40 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Gm9682-201ENSMUST00000197505 556 ntBASIC15.39■□□□□ 0.05
Trim60Q8VI40 Gm7787-201ENSMUST00000216858 688 ntBASIC15.39■□□□□ 0.05
Trim60Q8VI40 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.39■□□□□ 0.05
Trim60Q8VI40 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim60Q8VI40 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.38■□□□□ 0.05
Trim60Q8VI40 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.38■□□□□ 0.05
Trim60Q8VI40 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Gm13418-201ENSMUST00000119097 944 ntBASIC15.38■□□□□ 0.05
Trim60Q8VI40 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.38■□□□□ 0.05
Trim60Q8VI40 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Gm6089-201ENSMUST00000197666 938 ntBASIC15.38■□□□□ 0.05
Trim60Q8VI40 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.38■□□□□ 0.05
Trim60Q8VI40 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.38■□□□□ 0.05
Trim60Q8VI40 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms