Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Gm8749-201ENSMUST00000117737 331 ntBASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Gm5264-201ENSMUST00000190584 848 ntBASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpap2Q8VC34 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Gm8000-201ENSMUST00000188378 592 ntBASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpap2Q8VC34 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Gm15427-201ENSMUST00000117288 531 ntBASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Gm13464-201ENSMUST00000119418 935 ntBASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.29■□□□□ 0.2
Rpap2Q8VC34 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Gm10175-201ENSMUST00000086013 645 ntBASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms