Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd109Q8R422 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cd109Q8R422 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cd109Q8R422 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd109Q8R422 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd109Q8R422 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Cd109Q8R422 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Cd109Q8R422 AA619741-201ENSMUST00000195095 646 ntBASIC20.92■□□□□ 0.94
Cd109Q8R422 Gm42612-201ENSMUST00000197986 623 ntBASIC20.92■□□□□ 0.94
Cd109Q8R422 Gm43170-201ENSMUST00000199827 612 ntBASIC20.92■□□□□ 0.94
Cd109Q8R422 Gm7390-201ENSMUST00000212452 1216 ntBASIC20.92■□□□□ 0.94
Cd109Q8R422 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cd109Q8R422 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cd109Q8R422 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cd109Q8R422 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC20.92■□□□□ 0.94
Cd109Q8R422 Gm5763-201ENSMUST00000155951 1530 ntBASIC20.92■□□□□ 0.94
Cd109Q8R422 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd109Q8R422 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cd109Q8R422 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cd109Q8R422 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC20.91■□□□□ 0.94
Cd109Q8R422 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Gm21854-201ENSMUST00000179901 471 ntBASIC20.91■□□□□ 0.94
Cd109Q8R422 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC20.91■□□□□ 0.94
Cd109Q8R422 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cd109Q8R422 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC20.91■□□□□ 0.94
Cd109Q8R422 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd109Q8R422 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
Cd109Q8R422 Ldb3-207ENSMUST00000227819 1499 ntBASIC20.91■□□□□ 0.94
Cd109Q8R422 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cd109Q8R422 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Gm6912-201ENSMUST00000117218 544 ntBASIC20.9■□□□□ 0.94
Cd109Q8R422 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC20.9■□□□□ 0.94
Cd109Q8R422 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Gm10275-202ENSMUST00000168697 495 ntBASIC20.9■□□□□ 0.94
Cd109Q8R422 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC20.9■□□□□ 0.94
Cd109Q8R422 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC20.9■□□□□ 0.94
Cd109Q8R422 Gm10275-201ENSMUST00000092620 635 ntBASIC20.9■□□□□ 0.94
Cd109Q8R422 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC20.9■□□□□ 0.94
Cd109Q8R422 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.9■□□□□ 0.94
Cd109Q8R422 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Cd109Q8R422 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd109Q8R422 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC20.89■□□□□ 0.94
Cd109Q8R422 Gm14928-201ENSMUST00000120198 477 ntBASIC20.89■□□□□ 0.94
Cd109Q8R422 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC20.89■□□□□ 0.94
Cd109Q8R422 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC20.89■□□□□ 0.94
Cd109Q8R422 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd109Q8R422 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Cd109Q8R422 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cd109Q8R422 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.89■□□□□ 0.93
Cd109Q8R422 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC20.89■□□□□ 0.93
Cd109Q8R422 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd109Q8R422 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd109Q8R422 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd109Q8R422 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms