Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Gm27920-201ENSMUST00000183953 96 ntBASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Gm43125-201ENSMUST00000201724 730 ntBASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Gm13464-201ENSMUST00000119418 935 ntBASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Gm43474-201ENSMUST00000196415 774 ntBASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rpp40Q8R1F9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Gm11543-201ENSMUST00000120758 370 ntBASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Gm8396-201ENSMUST00000057361 823 ntBASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpp40Q8R1F9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Efs-202ENSMUST00000227037 2540 ntBASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Gm14701-201ENSMUST00000117156 348 ntBASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.9■□□□□ 0.14
Rpp40Q8R1F9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms