Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Mir770-201ENSMUST00000103252 94 ntBASIC9.38□□□□□ -0.91
Cystm1Q8K353 Gm14464-201ENSMUST00000119658 1254 ntBASIC9.38□□□□□ -0.91
Cystm1Q8K353 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Mir3081-201ENSMUST00000175305 84 ntBASIC9.37□□□□□ -0.91
Cystm1Q8K353 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Gm44065-201ENSMUST00000203184 3527 ntBASIC9.37□□□□□ -0.91
Cystm1Q8K353 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms