Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox30Q8CGW4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.27■□□□□ 0.19
Sox30Q8CGW4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox30Q8CGW4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Gm9726-201ENSMUST00000180321 678 ntBASIC16.26■□□□□ 0.19
Sox30Q8CGW4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Gm18669-201ENSMUST00000216049 778 ntBASIC16.26■□□□□ 0.19
Sox30Q8CGW4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox30Q8CGW4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox30Q8CGW4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Gm7222-201ENSMUST00000117512 906 ntBASIC16.24■□□□□ 0.19
Sox30Q8CGW4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Olfr286-202ENSMUST00000205305 969 ntBASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Gm18246-201ENSMUST00000221023 728 ntBASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox30Q8CGW4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms