Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Gm6659-201ENSMUST00000174752 547 ntBASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Fam228aQ8CDW1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Fam228aQ8CDW1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Fam228aQ8CDW1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Fam228aQ8CDW1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Gm10499-201ENSMUST00000174094 934 ntBASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fam228aQ8CDW1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Gm8097-201ENSMUST00000117903 829 ntBASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Fam228aQ8CDW1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Fam228aQ8CDW1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms