Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
E4f1Q8CCE9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.5■□□□□ 0.39
E4f1Q8CCE9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Gm12134-201ENSMUST00000122109 520 ntBASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
E4f1Q8CCE9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Mir6990-201ENSMUST00000183724 91 ntBASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
E4f1Q8CCE9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms