Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Gm15794-201ENSMUST00000120182 631 ntBASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Gm44430-201ENSMUST00000203376 995 ntBASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.48□□□□□ -0.41
Tsen54Q8C2A2 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tsen54Q8C2A2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms