Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm11452-201ENSMUST00000122376 690 ntBASIC13.15□□□□□ -0.3
SprnQ8BWU1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Gm28659-201ENSMUST00000188013 759 ntBASIC13.15□□□□□ -0.3
SprnQ8BWU1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.15□□□□□ -0.3
SprnQ8BWU1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.15□□□□□ -0.3
SprnQ8BWU1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SprnQ8BWU1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SprnQ8BWU1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.15□□□□□ -0.3
SprnQ8BWU1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.14□□□□□ -0.31
SprnQ8BWU1 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.14□□□□□ -0.31
SprnQ8BWU1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SprnQ8BWU1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.13□□□□□ -0.31
SprnQ8BWU1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Gm13884-201ENSMUST00000118103 829 ntBASIC13.13□□□□□ -0.31
SprnQ8BWU1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.13□□□□□ -0.31
SprnQ8BWU1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.13□□□□□ -0.31
SprnQ8BWU1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SprnQ8BWU1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SprnQ8BWU1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SprnQ8BWU1 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.12□□□□□ -0.31
SprnQ8BWU1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SprnQ8BWU1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SprnQ8BWU1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SprnQ8BWU1 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.12□□□□□ -0.31
SprnQ8BWU1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.12□□□□□ -0.31
SprnQ8BWU1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SprnQ8BWU1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SprnQ8BWU1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SprnQ8BWU1 Gm15358-201ENSMUST00000119249 520 ntBASIC13.12□□□□□ -0.31
SprnQ8BWU1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.12□□□□□ -0.31
SprnQ8BWU1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms