Protein–RNA interactions for Protein: Q8BVU0

Lrch3, Leucine-rich repeat and calponin homology domain-containing protein 3, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch3Q8BVU0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrch3Q8BVU0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Lrch3Q8BVU0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrch3Q8BVU0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Lrch3Q8BVU0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Lrch3Q8BVU0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Lrch3Q8BVU0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Gm29199-201ENSMUST00000187766 775 ntBASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrch3Q8BVU0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Gm5354-201ENSMUST00000182417 973 ntBASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Gm27631-201ENSMUST00000184163 466 ntBASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Mir7654-201ENSMUST00000185082 70 ntBASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrch3Q8BVU0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch3Q8BVU0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Lrch3Q8BVU0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms