Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Gm8097-201ENSMUST00000117903 829 ntBASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Gm10499-201ENSMUST00000174094 934 ntBASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Gm15372-201ENSMUST00000120729 834 ntBASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3bQ80YF6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Upk3bQ80YF6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Upk3bQ80YF6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Upk3bQ80YF6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms