Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Gm15806-201ENSMUST00000120696 955 ntBASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Gm6222-201ENSMUST00000120787 396 ntBASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Gm5354-201ENSMUST00000182417 973 ntBASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 AA619741-201ENSMUST00000195095 646 ntBASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Gm27701-201ENSMUST00000184498 110 ntBASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.41□□□□□ -0.42
Ttc28Q80XJ3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Gm2451-201ENSMUST00000199447 999 ntBASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Gm10290-201ENSMUST00000200451 999 ntBASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC12.4□□□□□ -0.42
Ttc28Q80XJ3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ttc28Q80XJ3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ttc28Q80XJ3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ttc28Q80XJ3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.4□□□□□ -0.43
Ttc28Q80XJ3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.4□□□□□ -0.43
Ttc28Q80XJ3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms