Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Prdm4Q80V63 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prdm4Q80V63 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prdm4Q80V63 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prdm4Q80V63 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Prdm4Q80V63 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Gm15794-201ENSMUST00000120182 631 ntBASIC15.52■□□□□ 0.08
Prdm4Q80V63 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.52■□□□□ 0.08
Prdm4Q80V63 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prdm4Q80V63 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Prdm4Q80V63 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Prdm4Q80V63 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.51■□□□□ 0.07
Prdm4Q80V63 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.51■□□□□ 0.07
Prdm4Q80V63 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prdm4Q80V63 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.5■□□□□ 0.07
Prdm4Q80V63 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.5■□□□□ 0.07
Prdm4Q80V63 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Mir6404-201ENSMUST00000183699 94 ntBASIC15.5■□□□□ 0.07
Prdm4Q80V63 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Prdm4Q80V63 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.5■□□□□ 0.07
Prdm4Q80V63 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms