Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pds5aQ6A026 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16■□□□□ 0.15
Pds5aQ6A026 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pds5aQ6A026 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pds5aQ6A026 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.99■□□□□ 0.15
Pds5aQ6A026 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Rprl2-201ENSMUST00000157150 290 ntBASIC15.99■□□□□ 0.15
Pds5aQ6A026 Gm18057-201ENSMUST00000208220 503 ntBASIC15.99■□□□□ 0.15
Pds5aQ6A026 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pds5aQ6A026 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.98■□□□□ 0.15
Pds5aQ6A026 Gm13464-201ENSMUST00000119418 935 ntBASIC15.98■□□□□ 0.15
Pds5aQ6A026 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.98■□□□□ 0.15
Pds5aQ6A026 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.98■□□□□ 0.15
Pds5aQ6A026 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pds5aQ6A026 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Gm18889-201ENSMUST00000174284 929 ntBASIC15.97■□□□□ 0.15
Pds5aQ6A026 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.97■□□□□ 0.15
Pds5aQ6A026 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.97■□□□□ 0.15
Pds5aQ6A026 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pds5aQ6A026 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.97■□□□□ 0.15
Pds5aQ6A026 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pds5aQ6A026 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms