Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa2Q62193 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Rpa2Q62193 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa2Q62193 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa2Q62193 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa2Q62193 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa2Q62193 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa2Q62193 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.68□□□□□ -0.22
Rpa2Q62193 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rpa2Q62193 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa2Q62193 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.67□□□□□ -0.22
Rpa2Q62193 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.67□□□□□ -0.22
Rpa2Q62193 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Rpa2Q62193 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.67□□□□□ -0.22
Rpa2Q62193 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa2Q62193 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rpa2Q62193 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpa2Q62193 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpa2Q62193 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rpa2Q62193 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.66□□□□□ -0.22
Rpa2Q62193 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa2Q62193 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Rpa2Q62193 Gm12008-201ENSMUST00000117791 755 ntBASIC13.66□□□□□ -0.22
Rpa2Q62193 Gm15467-201ENSMUST00000120582 445 ntBASIC13.66□□□□□ -0.22
Rpa2Q62193 Gm11594-201ENSMUST00000122313 162 ntBASIC13.66□□□□□ -0.22
Rpa2Q62193 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpa2Q62193 Gm8000-201ENSMUST00000188378 592 ntBASIC13.66□□□□□ -0.22
Rpa2Q62193 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms