Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fam196aQ3USH1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Gm45453-201ENSMUST00000211758 853 ntBASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Fam196aQ3USH1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Gm15198-201ENSMUST00000117283 177 ntBASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Gm15678-201ENSMUST00000117573 960 ntBASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Gm27839-201ENSMUST00000184242 106 ntBASIC14.86□□□□□ -0.03
Fam196aQ3USH1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fam196aQ3USH1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Mir3102-201ENSMUST00000175555 104 ntBASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.85□□□□□ -0.03
Fam196aQ3USH1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms