Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nlrc4Q3UP24 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Efs-202ENSMUST00000227037 2540 ntBASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Gm11745-201ENSMUST00000121669 448 ntBASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Gm2756-201ENSMUST00000195851 400 ntBASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.66■□□□□ 0.1
Nlrc4Q3UP24 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Gm15483-201ENSMUST00000120338 456 ntBASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Gm27494-201ENSMUST00000184735 189 ntBASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nlrc4Q3UP24 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Gm23935-201ENSMUST00000102303 57 ntBASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Gm24270-201ENSMUST00000102326 57 ntBASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Gm24245-201ENSMUST00000157318 57 ntBASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.64■□□□□ 0.09
Nlrc4Q3UP24 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms