Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Gm5566-201ENSMUST00000116118 459 ntBASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg7Q3ULF4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Gm8749-201ENSMUST00000117737 331 ntBASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg7Q3ULF4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Spg7Q3ULF4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Spg7Q3ULF4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Spg7Q3ULF4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Spg7Q3ULF4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Gm9719-201ENSMUST00000162765 543 ntBASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Gm27437-201ENSMUST00000183429 107 ntBASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Gm27533-201ENSMUST00000183800 152 ntBASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.64■□□□□ 0.41
Spg7Q3ULF4 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg7Q3ULF4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg7Q3ULF4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg7Q3ULF4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg7Q3ULF4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Spg7Q3ULF4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Spg7Q3ULF4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg7Q3ULF4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg7Q3ULF4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Spg7Q3ULF4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg7Q3ULF4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms