Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox4Q06831 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox4Q06831 Gm45612-201ENSMUST00000211320 160 ntBASIC14.63□□□□□ -0.07
Sox4Q06831 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox4Q06831 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.63□□□□□ -0.07
Sox4Q06831 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sox4Q06831 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.63□□□□□ -0.07
Sox4Q06831 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sox4Q06831 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.62□□□□□ -0.07
Sox4Q06831 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Gm11745-201ENSMUST00000121669 448 ntBASIC14.62□□□□□ -0.07
Sox4Q06831 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.62□□□□□ -0.07
Sox4Q06831 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sox4Q06831 Gm27494-201ENSMUST00000184735 189 ntBASIC14.62□□□□□ -0.07
Sox4Q06831 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.62□□□□□ -0.07
Sox4Q06831 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.62□□□□□ -0.07
Sox4Q06831 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Sox4Q06831 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.62□□□□□ -0.07
Sox4Q06831 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.62□□□□□ -0.07
Sox4Q06831 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox4Q06831 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Sox4Q06831 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox4Q06831 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sox4Q06831 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sox4Q06831 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox4Q06831 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox4Q06831 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox4Q06831 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Sox4Q06831 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox4Q06831 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox4Q06831 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sox4Q06831 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Sox4Q06831 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.6□□□□□ -0.07
Sox4Q06831 Mir1895-201ENSMUST00000122615 79 ntBASIC14.6□□□□□ -0.07
Sox4Q06831 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox4Q06831 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.6□□□□□ -0.07
Sox4Q06831 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox4Q06831 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.6□□□□□ -0.07
Sox4Q06831 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms