Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.21□□□□□ -0.13
Atf4Q06507 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.21□□□□□ -0.13
Atf4Q06507 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.21□□□□□ -0.13
Atf4Q06507 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.21□□□□□ -0.13
Atf4Q06507 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.21□□□□□ -0.13
Atf4Q06507 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.21□□□□□ -0.13
Atf4Q06507 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Atf4Q06507 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Atf4Q06507 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Atf4Q06507 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atf4Q06507 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atf4Q06507 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atf4Q06507 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.21□□□□□ -0.14
Atf4Q06507 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atf4Q06507 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Atf4Q06507 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atf4Q06507 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atf4Q06507 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atf4Q06507 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atf4Q06507 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.2□□□□□ -0.14
Atf4Q06507 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Atf4Q06507 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Atf4Q06507 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Atf4Q06507 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.2□□□□□ -0.14
Atf4Q06507 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Atf4Q06507 Gm23757-201ENSMUST00000158353 100 ntBASIC14.2□□□□□ -0.14
Atf4Q06507 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Gm5177-201ENSMUST00000183092 997 ntBASIC14.2□□□□□ -0.14
Atf4Q06507 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.2□□□□□ -0.14
Atf4Q06507 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Atf4Q06507 Gm40332-201ENSMUST00000199847 938 ntBASIC14.2□□□□□ -0.14
Atf4Q06507 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 AC129323.1-201ENSMUST00000216733 470 ntBASIC14.2□□□□□ -0.14
Atf4Q06507 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC14.2□□□□□ -0.14
Atf4Q06507 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.2□□□□□ -0.14
Atf4Q06507 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Atf4Q06507 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.2□□□□□ -0.14
Atf4Q06507 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf4Q06507 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Atf4Q06507 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.19□□□□□ -0.14
Atf4Q06507 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.19□□□□□ -0.14
Atf4Q06507 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atf4Q06507 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Atf4Q06507 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Atf4Q06507 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.19□□□□□ -0.14
Atf4Q06507 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.19□□□□□ -0.14
Atf4Q06507 Mir6990-201ENSMUST00000183724 91 ntBASIC14.19□□□□□ -0.14
Atf4Q06507 Gm38216-201ENSMUST00000194872 1214 ntBASIC14.19□□□□□ -0.14
Atf4Q06507 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Atf4Q06507 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Atf4Q06507 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.19□□□□□ -0.14
Atf4Q06507 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.19□□□□□ -0.14
Atf4Q06507 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.19□□□□□ -0.14
Atf4Q06507 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms