Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a2Q02788 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.85□□□□□ -0.03
Col6a2Q02788 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a2Q02788 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.85□□□□□ -0.03
Col6a2Q02788 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col6a2Q02788 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.85□□□□□ -0.03
Col6a2Q02788 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col6a2Q02788 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a2Q02788 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a2Q02788 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col6a2Q02788 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.84□□□□□ -0.03
Col6a2Q02788 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.84□□□□□ -0.03
Col6a2Q02788 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.84□□□□□ -0.03
Col6a2Q02788 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.84□□□□□ -0.03
Col6a2Q02788 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.84□□□□□ -0.03
Col6a2Q02788 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.84□□□□□ -0.03
Col6a2Q02788 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a2Q02788 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Col6a2Q02788 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.83□□□□□ -0.03
Col6a2Q02788 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a2Q02788 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a2Q02788 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a2Q02788 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Col6a2Q02788 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a2Q02788 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a2Q02788 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.83□□□□□ -0.04
Col6a2Q02788 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.83□□□□□ -0.04
Col6a2Q02788 Gm11543-201ENSMUST00000120758 370 ntBASIC14.83□□□□□ -0.04
Col6a2Q02788 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Col6a2Q02788 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Gm37444-201ENSMUST00000193605 439 ntBASIC14.83□□□□□ -0.04
Col6a2Q02788 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.83□□□□□ -0.04
Col6a2Q02788 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.83□□□□□ -0.04
Col6a2Q02788 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.83□□□□□ -0.04
Col6a2Q02788 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.83□□□□□ -0.04
Col6a2Q02788 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a2Q02788 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms