Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.85■□□□□ 0.29
GabpaQ00422 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.85■□□□□ 0.29
GabpaQ00422 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
GabpaQ00422 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.84■□□□□ 0.29
GabpaQ00422 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Gm27989-201ENSMUST00000184721 107 ntBASIC16.84■□□□□ 0.29
GabpaQ00422 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.84■□□□□ 0.29
GabpaQ00422 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.84■□□□□ 0.29
GabpaQ00422 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GabpaQ00422 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.84■□□□□ 0.29
GabpaQ00422 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
GabpaQ00422 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
GabpaQ00422 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GabpaQ00422 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.83■□□□□ 0.28
GabpaQ00422 Gm12428-201ENSMUST00000119844 727 ntBASIC16.83■□□□□ 0.28
GabpaQ00422 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.83■□□□□ 0.28
GabpaQ00422 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.83■□□□□ 0.28
GabpaQ00422 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GabpaQ00422 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Gm27533-201ENSMUST00000183800 152 ntBASIC16.83■□□□□ 0.28
GabpaQ00422 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.83■□□□□ 0.28
GabpaQ00422 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.83■□□□□ 0.28
GabpaQ00422 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.83■□□□□ 0.28
GabpaQ00422 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
GabpaQ00422 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GabpaQ00422 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GabpaQ00422 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GabpaQ00422 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.82■□□□□ 0.28
GabpaQ00422 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.82■□□□□ 0.28
GabpaQ00422 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.82■□□□□ 0.28
GabpaQ00422 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.82■□□□□ 0.28
GabpaQ00422 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.82■□□□□ 0.28
GabpaQ00422 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GabpaQ00422 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GabpaQ00422 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.82■□□□□ 0.28
GabpaQ00422 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GabpaQ00422 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
GabpaQ00422 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GabpaQ00422 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GabpaQ00422 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GabpaQ00422 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GabpaQ00422 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms