Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.72□□□□□ -0.05
Shox2P70390 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Grk6-207ENSMUST00000225925 2769 ntBASIC14.72□□□□□ -0.05
Shox2P70390 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.72□□□□□ -0.05
Shox2P70390 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.71□□□□□ -0.05
Shox2P70390 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shox2P70390 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.71□□□□□ -0.05
Shox2P70390 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shox2P70390 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shox2P70390 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Shox2P70390 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Shox2P70390 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shox2P70390 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Shox2P70390 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.71□□□□□ -0.06
Shox2P70390 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shox2P70390 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shox2P70390 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Shox2P70390 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Shox2P70390 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.7□□□□□ -0.06
Shox2P70390 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.7□□□□□ -0.06
Shox2P70390 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Shox2P70390 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.7□□□□□ -0.06
Shox2P70390 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Shox2P70390 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Shox2P70390 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Shox2P70390 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Shox2P70390 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.7□□□□□ -0.06
Shox2P70390 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shox2P70390 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.69□□□□□ -0.06
Shox2P70390 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.69□□□□□ -0.06
Shox2P70390 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.69□□□□□ -0.06
Shox2P70390 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Shox2P70390 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.69□□□□□ -0.06
Shox2P70390 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Shox2P70390 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shox2P70390 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.68□□□□□ -0.06
Shox2P70390 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shox2P70390 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms