Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Cks1bP61025 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.66□□□□□ -0.7
Cks1bP61025 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cks1bP61025 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.66□□□□□ -0.7
Cks1bP61025 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Gm21814-202ENSMUST00000203277 873 ntBASIC10.66□□□□□ -0.7
Cks1bP61025 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.66□□□□□ -0.7
Cks1bP61025 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Gm38327-201ENSMUST00000195852 1755 ntBASIC10.66□□□□□ -0.7
Cks1bP61025 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Cks1bP61025 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks1bP61025 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Cks1bP61025 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Cks1bP61025 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks1bP61025 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks1bP61025 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1bP61025 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.65□□□□□ -0.7
Cks1bP61025 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cks1bP61025 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC10.65□□□□□ -0.7
Cks1bP61025 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.65□□□□□ -0.7
Cks1bP61025 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC10.65□□□□□ -0.7
Cks1bP61025 Gm7370-201ENSMUST00000219471 767 ntBASIC10.65□□□□□ -0.7
Cks1bP61025 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cks1bP61025 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Cks1bP61025 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1bP61025 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Cks1bP61025 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.65□□□□□ -0.71
Cks1bP61025 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1bP61025 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1bP61025 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1bP61025 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1bP61025 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1bP61025 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1bP61025 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1bP61025 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1bP61025 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1bP61025 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cks1bP61025 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms