Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.63■□□□□ 0.25
Tpm1P58771 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tpm1P58771 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.63■□□□□ 0.25
Tpm1P58771 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tpm1P58771 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tpm1P58771 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Tpm1P58771 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tpm1P58771 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.62■□□□□ 0.25
Tpm1P58771 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tpm1P58771 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tpm1P58771 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Tpm1P58771 Mir3081-201ENSMUST00000175305 84 ntBASIC16.62■□□□□ 0.25
Tpm1P58771 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.62■□□□□ 0.25
Tpm1P58771 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.62■□□□□ 0.25
Tpm1P58771 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tpm1P58771 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tpm1P58771 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tpm1P58771 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tpm1P58771 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tpm1P58771 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tpm1P58771 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Gm29518-201ENSMUST00000190858 372 ntBASIC16.61■□□□□ 0.25
Tpm1P58771 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tpm1P58771 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.61■□□□□ 0.25
Tpm1P58771 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.61■□□□□ 0.25
Tpm1P58771 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tpm1P58771 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Tpm1P58771 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.61■□□□□ 0.25
Tpm1P58771 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.61■□□□□ 0.25
Tpm1P58771 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tpm1P58771 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.6■□□□□ 0.25
Tpm1P58771 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.6■□□□□ 0.25
Tpm1P58771 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.6■□□□□ 0.25
Tpm1P58771 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tpm1P58771 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tpm1P58771 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Tpm1P58771 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tpm1P58771 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Tpm1P58771 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.6■□□□□ 0.25
Tpm1P58771 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tpm1P58771 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tpm1P58771 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tpm1P58771 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.59■□□□□ 0.25
Tpm1P58771 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Tpm1P58771 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tpm1P58771 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms