Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.67■□□□□ 0.42
Ercc3P49135 Gm10154-201ENSMUST00000084445 354 ntBASIC17.67■□□□□ 0.42
Ercc3P49135 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ercc3P49135 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
Ercc3P49135 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ercc3P49135 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ercc3P49135 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.67■□□□□ 0.42
Ercc3P49135 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Ercc3P49135 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.66■□□□□ 0.42
Ercc3P49135 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.66■□□□□ 0.42
Ercc3P49135 Gm27702-201ENSMUST00000184512 56 ntBASIC17.66■□□□□ 0.42
Ercc3P49135 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.66■□□□□ 0.42
Ercc3P49135 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.66■□□□□ 0.42
Ercc3P49135 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.66■□□□□ 0.42
Ercc3P49135 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc3P49135 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Ercc3P49135 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.65■□□□□ 0.42
Ercc3P49135 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.65■□□□□ 0.42
Ercc3P49135 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ercc3P49135 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ercc3P49135 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.65■□□□□ 0.42
Ercc3P49135 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.65■□□□□ 0.42
Ercc3P49135 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.65■□□□□ 0.42
Ercc3P49135 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ercc3P49135 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.65■□□□□ 0.42
Ercc3P49135 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ercc3P49135 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ercc3P49135 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc3P49135 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ercc3P49135 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.64■□□□□ 0.41
Ercc3P49135 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.64■□□□□ 0.41
Ercc3P49135 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ercc3P49135 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.64■□□□□ 0.41
Ercc3P49135 Gm43767-201ENSMUST00000198933 381 ntBASIC17.64■□□□□ 0.41
Ercc3P49135 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ercc3P49135 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.64■□□□□ 0.41
Ercc3P49135 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.64■□□□□ 0.41
Ercc3P49135 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.64■□□□□ 0.41
Ercc3P49135 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Ercc3P49135 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ercc3P49135 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ercc3P49135 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ercc3P49135 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc3P49135 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ercc3P49135 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.63■□□□□ 0.41
Ercc3P49135 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Gm15427-201ENSMUST00000117288 531 ntBASIC17.63■□□□□ 0.41
Ercc3P49135 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.63■□□□□ 0.41
Ercc3P49135 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc3P49135 Gm25925-201ENSMUST00000158314 306 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms