Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Atoh1P48985 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Atoh1P48985 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.71■□□□□ 0.27
Atoh1P48985 Gm11425-201ENSMUST00000119608 498 ntBASIC16.71■□□□□ 0.27
Atoh1P48985 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.71■□□□□ 0.27
Atoh1P48985 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.71■□□□□ 0.27
Atoh1P48985 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.71■□□□□ 0.27
Atoh1P48985 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.71■□□□□ 0.27
Atoh1P48985 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.71■□□□□ 0.27
Atoh1P48985 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atoh1P48985 Gm9396-201ENSMUST00000076703 567 ntBASIC16.71■□□□□ 0.27
Atoh1P48985 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Atoh1P48985 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Atoh1P48985 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atoh1P48985 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Atoh1P48985 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atoh1P48985 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atoh1P48985 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Atoh1P48985 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Atoh1P48985 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.7■□□□□ 0.26
Atoh1P48985 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.7■□□□□ 0.26
Atoh1P48985 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.7■□□□□ 0.26
Atoh1P48985 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Atoh1P48985 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.7■□□□□ 0.26
Atoh1P48985 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atoh1P48985 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Atoh1P48985 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Atoh1P48985 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.69■□□□□ 0.26
Atoh1P48985 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Atoh1P48985 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.69■□□□□ 0.26
Atoh1P48985 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Atoh1P48985 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Atoh1P48985 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Atoh1P48985 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.69■□□□□ 0.26
Atoh1P48985 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atoh1P48985 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Atoh1P48985 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Atoh1P48985 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Atoh1P48985 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Atoh1P48985 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.68■□□□□ 0.26
Atoh1P48985 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.68■□□□□ 0.26
Atoh1P48985 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.68■□□□□ 0.26
Atoh1P48985 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.68■□□□□ 0.26
Atoh1P48985 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms