Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rfx3P48381 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Rfx3P48381 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.46□□□□□ -0.25
Rfx3P48381 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.46□□□□□ -0.25
Rfx3P48381 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Rfx3P48381 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rfx3P48381 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Rfx3P48381 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.46□□□□□ -0.25
Rfx3P48381 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.46□□□□□ -0.25
Rfx3P48381 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.46□□□□□ -0.25
Rfx3P48381 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.46□□□□□ -0.25
Rfx3P48381 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Gm8318-201ENSMUST00000182954 872 ntBASIC13.46□□□□□ -0.25
Rfx3P48381 Gm27646-201ENSMUST00000183989 110 ntBASIC13.46□□□□□ -0.25
Rfx3P48381 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx3P48381 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.46□□□□□ -0.26
Rfx3P48381 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Rfx3P48381 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfx3P48381 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfx3P48381 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Rfx3P48381 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Rfx3P48381 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Rfx3P48381 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Rfx3P48381 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.45□□□□□ -0.26
Rfx3P48381 Gm13418-201ENSMUST00000119097 944 ntBASIC13.45□□□□□ -0.26
Rfx3P48381 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Rfx3P48381 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Rfx3P48381 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.45□□□□□ -0.26
Rfx3P48381 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.45□□□□□ -0.26
Rfx3P48381 Gm34391-201ENSMUST00000203706 907 ntBASIC13.45□□□□□ -0.26
Rfx3P48381 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rfx3P48381 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rfx3P48381 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.45□□□□□ -0.26
Rfx3P48381 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rfx3P48381 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx3P48381 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.44□□□□□ -0.26
Rfx3P48381 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.44□□□□□ -0.26
Rfx3P48381 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.44□□□□□ -0.26
Rfx3P48381 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rfx3P48381 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rfx3P48381 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.44□□□□□ -0.26
Rfx3P48381 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.44□□□□□ -0.26
Rfx3P48381 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rfx3P48381 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.44□□□□□ -0.26
Rfx3P48381 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rfx3P48381 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx3P48381 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfx3P48381 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfx3P48381 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.43□□□□□ -0.26
Rfx3P48381 Gm24589-201ENSMUST00000116692 94 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms