Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.31□□□□□ -0.44
Hist1h1aP43275 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.31□□□□□ -0.44
Hist1h1aP43275 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Gm7506-201ENSMUST00000207758 815 ntBASIC12.31□□□□□ -0.44
Hist1h1aP43275 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.31□□□□□ -0.44
Hist1h1aP43275 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h1aP43275 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.3□□□□□ -0.44
Hist1h1aP43275 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.3□□□□□ -0.44
Hist1h1aP43275 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h1aP43275 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hist1h1aP43275 Gm33142-201ENSMUST00000193913 867 ntBASIC12.29□□□□□ -0.44
Hist1h1aP43275 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hist1h1aP43275 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.29□□□□□ -0.44
Hist1h1aP43275 Gm8655-201ENSMUST00000221159 852 ntBASIC12.29□□□□□ -0.44
Hist1h1aP43275 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms