Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.23□□□□□ -0.13
Tnfsf9P41274 Gm13616-201ENSMUST00000120600 222 ntBASIC14.23□□□□□ -0.13
Tnfsf9P41274 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.23□□□□□ -0.13
Tnfsf9P41274 Gm24158-201ENSMUST00000175263 71 ntBASIC14.23□□□□□ -0.13
Tnfsf9P41274 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.23□□□□□ -0.13
Tnfsf9P41274 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf9P41274 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tnfsf9P41274 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Gm10576-201ENSMUST00000191927 825 ntBASIC14.22□□□□□ -0.13
Tnfsf9P41274 Gm7774-201ENSMUST00000200064 533 ntBASIC14.22□□□□□ -0.13
Tnfsf9P41274 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.22□□□□□ -0.13
Tnfsf9P41274 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.22□□□□□ -0.13
Tnfsf9P41274 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.22□□□□□ -0.13
Tnfsf9P41274 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf9P41274 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.21□□□□□ -0.13
Tnfsf9P41274 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.21□□□□□ -0.13
Tnfsf9P41274 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Mir6956-201ENSMUST00000183598 62 ntBASIC14.21□□□□□ -0.13
Tnfsf9P41274 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Gm10253-201ENSMUST00000194270 940 ntBASIC14.21□□□□□ -0.13
Tnfsf9P41274 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.21□□□□□ -0.13
Tnfsf9P41274 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf9P41274 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.21□□□□□ -0.14
Tnfsf9P41274 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Tnfsf9P41274 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf9P41274 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf9P41274 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf9P41274 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf9P41274 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf9P41274 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf9P41274 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms