Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm43697-201ENSMUST00000199637 2581 ntBASIC14□□□□□ -0.17
Sox6P40645 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sox6P40645 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sox6P40645 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Sox6P40645 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Gm27741-201ENSMUST00000185060 237 ntBASIC14□□□□□ -0.17
Sox6P40645 Gm6376-201ENSMUST00000209407 580 ntBASIC14□□□□□ -0.17
Sox6P40645 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14□□□□□ -0.17
Sox6P40645 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sox6P40645 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14□□□□□ -0.17
Sox6P40645 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox6P40645 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox6P40645 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.99□□□□□ -0.17
Sox6P40645 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox6P40645 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Sox6P40645 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Sox6P40645 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox6P40645 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.99□□□□□ -0.17
Sox6P40645 Gm19164-201ENSMUST00000210667 640 ntBASIC13.99□□□□□ -0.17
Sox6P40645 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox6P40645 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Sox6P40645 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox6P40645 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sox6P40645 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.99□□□□□ -0.17
Sox6P40645 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.99□□□□□ -0.17
Sox6P40645 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox6P40645 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox6P40645 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Sox6P40645 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.98□□□□□ -0.17
Sox6P40645 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox6P40645 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44357-201ENSMUST00000195897 142 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm19658-201ENSMUST00000196231 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44367-201ENSMUST00000196836 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44350-201ENSMUST00000197197 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44390-201ENSMUST00000197533 144 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44313-201ENSMUST00000198018 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44486-201ENSMUST00000198508 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44314-201ENSMUST00000199263 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44394-201ENSMUST00000199558 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44484-201ENSMUST00000199873 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44466-201ENSMUST00000200264 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44359-201ENSMUST00000200671 138 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm5864-201ENSMUST00000202263 970 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.98□□□□□ -0.17
Sox6P40645 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.98□□□□□ -0.17
Sox6P40645 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox6P40645 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms