Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a13P31649 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.1■□□□□ 0.01
Slc6a13P31649 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a13P31649 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a13P31649 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a13P31649 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a13P31649 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.1■□□□□ 0.01
Slc6a13P31649 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Gm25911-201ENSMUST00000157621 56 ntBASIC15.1■□□□□ 0.01
Slc6a13P31649 Gm16026-204ENSMUST00000162652 683 ntBASIC15.1■□□□□ 0.01
Slc6a13P31649 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.1■□□□□ 0.01
Slc6a13P31649 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Slc6a13P31649 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a13P31649 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.1■□□□□ 0.01
Slc6a13P31649 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a13P31649 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Slc6a13P31649 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Slc6a13P31649 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Gm20553-201ENSMUST00000204205 844 ntBASIC15.09■□□□□ 0.01
Slc6a13P31649 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Slc6a13P31649 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a13P31649 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.09■□□□□ 0.01
Slc6a13P31649 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Slc6a13P31649 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a13P31649 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a13P31649 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a13P31649 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.08■□□□□ 0.01
Slc6a13P31649 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Slc6a13P31649 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Slc6a13P31649 Gm15427-201ENSMUST00000117288 531 ntBASIC15.08■□□□□ 0
Slc6a13P31649 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.08■□□□□ 0
Slc6a13P31649 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.08■□□□□ 0
Slc6a13P31649 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc6a13P31649 Rpph1-201ENSMUST00000175096 319 ntBASIC15.08■□□□□ 0
Slc6a13P31649 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.08■□□□□ 0
Slc6a13P31649 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.08■□□□□ 0
Slc6a13P31649 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.08■□□□□ 0
Slc6a13P31649 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.08■□□□□ 0
Slc6a13P31649 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc6a13P31649 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.08■□□□□ 0
Slc6a13P31649 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a13P31649 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a13P31649 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Slc6a13P31649 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a13P31649 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a13P31649 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a13P31649 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a13P31649 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a13P31649 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.07■□□□□ 0
Slc6a13P31649 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc6a13P31649 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms