Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.84□□□□□ -0.35
Slc6a1P31648 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.84□□□□□ -0.35
Slc6a1P31648 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.84□□□□□ -0.35
Slc6a1P31648 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slc6a1P31648 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slc6a1P31648 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Slc6a1P31648 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slc6a1P31648 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.83□□□□□ -0.36
Slc6a1P31648 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.83□□□□□ -0.36
Slc6a1P31648 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.83□□□□□ -0.36
Slc6a1P31648 Gm27742-201ENSMUST00000184667 60 ntBASIC12.83□□□□□ -0.36
Slc6a1P31648 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.83□□□□□ -0.36
Slc6a1P31648 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Slc6a1P31648 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Slc6a1P31648 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a1P31648 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Slc6a1P31648 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.82□□□□□ -0.36
Slc6a1P31648 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Mir6404-201ENSMUST00000183699 94 ntBASIC12.82□□□□□ -0.36
Slc6a1P31648 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.82□□□□□ -0.36
Slc6a1P31648 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.82□□□□□ -0.36
Slc6a1P31648 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Slc6a1P31648 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Slc6a1P31648 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a1P31648 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms