Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Sybu-209ENSMUST00000228639 4113 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc11P31313 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxc11P31313 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxc11P31313 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Gm13365-201ENSMUST00000121188 973 ntBASIC14.42□□□□□ -0.1
Hoxc11P31313 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.42□□□□□ -0.1
Hoxc11P31313 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.42□□□□□ -0.1
Hoxc11P31313 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.42□□□□□ -0.1
Hoxc11P31313 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.42□□□□□ -0.1
Hoxc11P31313 Gm5312-201ENSMUST00000203728 547 ntBASIC14.42□□□□□ -0.1
Hoxc11P31313 Gm20553-201ENSMUST00000204205 844 ntBASIC14.42□□□□□ -0.1
Hoxc11P31313 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.42□□□□□ -0.1
Hoxc11P31313 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.42□□□□□ -0.1
Hoxc11P31313 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.42□□□□□ -0.1
Hoxc11P31313 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc11P31313 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hoxc11P31313 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.42□□□□□ -0.1
Hoxc11P31313 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc11P31313 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc11P31313 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc11P31313 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Gm44335-201ENSMUST00000196879 141 ntBASIC14.41□□□□□ -0.1
Hoxc11P31313 Gm44297-201ENSMUST00000198304 141 ntBASIC14.41□□□□□ -0.1
Hoxc11P31313 Gm44346-201ENSMUST00000198851 141 ntBASIC14.41□□□□□ -0.1
Hoxc11P31313 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.41□□□□□ -0.1
Hoxc11P31313 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hoxc11P31313 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.41□□□□□ -0.1
Hoxc11P31313 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hoxc11P31313 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc11P31313 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc11P31313 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxc11P31313 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.4□□□□□ -0.1
Hoxc11P31313 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
Hoxc11P31313 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Mir6990-201ENSMUST00000183724 91 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms