Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.37□□□□□ -0.27
Cd48P18181 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.37□□□□□ -0.27
Cd48P18181 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.37□□□□□ -0.27
Cd48P18181 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.37□□□□□ -0.27
Cd48P18181 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.37□□□□□ -0.27
Cd48P18181 Gm6296-201ENSMUST00000222599 943 ntBASIC13.37□□□□□ -0.27
Cd48P18181 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.37□□□□□ -0.27
Cd48P18181 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cd48P18181 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.37□□□□□ -0.27
Cd48P18181 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd48P18181 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cd48P18181 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cd48P18181 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cd48P18181 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.36□□□□□ -0.27
Cd48P18181 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Cd48P18181 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.36□□□□□ -0.27
Cd48P18181 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd48P18181 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd48P18181 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.36□□□□□ -0.27
Cd48P18181 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd48P18181 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cd48P18181 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
Cd48P18181 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd48P18181 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Cd48P18181 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cd48P18181 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.35□□□□□ -0.27
Cd48P18181 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cd48P18181 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.35□□□□□ -0.27
Cd48P18181 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Gm18489-201ENSMUST00000172565 551 ntBASIC13.35□□□□□ -0.27
Cd48P18181 Gm7977-201ENSMUST00000193787 748 ntBASIC13.35□□□□□ -0.27
Cd48P18181 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cd48P18181 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Celf4-206ENSMUST00000224553 1729 ntBASIC13.35□□□□□ -0.27
Cd48P18181 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cd48P18181 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cd48P18181 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.35□□□□□ -0.27
Cd48P18181 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd48P18181 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.35□□□□□ -0.27
Cd48P18181 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd48P18181 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cd48P18181 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms