Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.5□□□□□ -0.73
Hbb-b1P02088 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Gm42642-201ENSMUST00000200683 355 ntBASIC10.5□□□□□ -0.73
Hbb-b1P02088 AV356131-201ENSMUST00000206201 750 ntBASIC10.5□□□□□ -0.73
Hbb-b1P02088 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Gm18041-201ENSMUST00000218210 618 ntBASIC10.5□□□□□ -0.73
Hbb-b1P02088 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hbb-b1P02088 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hbb-b1P02088 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms