Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALDH1A1P00352 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALDH1A1P00352 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALDH1A1P00352 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALDH1A1P00352 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALDH1A1P00352 AC002056.1-201ENST00000395613 760 ntBASIC20.19■□□□□ 0.82
ALDH1A1P00352 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.19■□□□□ 0.82
ALDH1A1P00352 ADH5P3-201ENST00000433842 1137 ntBASIC20.19■□□□□ 0.82
ALDH1A1P00352 FAM207CP-201ENST00000443486 507 ntBASIC20.19■□□□□ 0.82
ALDH1A1P00352 TIMM8BP1-201ENST00000452384 211 ntBASIC20.19■□□□□ 0.82
ALDH1A1P00352 STK19B-204ENST00000512515 211 ntBASIC20.19■□□□□ 0.82
ALDH1A1P00352 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 RN7SL204P-201ENST00000582831 262 ntBASIC20.19■□□□□ 0.82
ALDH1A1P00352 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALDH1A1P00352 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALDH1A1P00352 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALDH1A1P00352 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.19■□□□□ 0.82
ALDH1A1P00352 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALDH1A1P00352 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A1P00352 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A1P00352 AL157384.1-201ENST00000445995 2473 ntBASIC20.18■□□□□ 0.82
ALDH1A1P00352 AC006116.8-202ENST00000587620 1550 ntBASIC20.18■□□□□ 0.82
ALDH1A1P00352 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 TFAMP1-201ENST00000412727 736 ntBASIC20.18■□□□□ 0.82
ALDH1A1P00352 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A1P00352 AL512356.2-201ENST00000546955 174 ntBASIC20.18■□□□□ 0.82
ALDH1A1P00352 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 AC051619.7-201ENST00000568314 623 ntBASIC20.18■□□□□ 0.82
ALDH1A1P00352 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A1P00352 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A1P00352 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A1P00352 PI4KAP1-204ENST00000612579 1703 ntBASIC20.18■□□□□ 0.82
ALDH1A1P00352 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A1P00352 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.18■□□□□ 0.82
ALDH1A1P00352 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 AC005237.2-201ENST00000434368 219 ntBASIC20.17■□□□□ 0.82
ALDH1A1P00352 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 FAM185BP-201ENST00000443595 716 ntBASIC20.17■□□□□ 0.82
ALDH1A1P00352 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 DUTP2-201ENST00000519164 463 ntBASIC20.17■□□□□ 0.82
ALDH1A1P00352 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A1P00352 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ALDH1A1P00352 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
ALDH1A1P00352 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A1P00352 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A1P00352 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.16■□□□□ 0.82
ALDH1A1P00352 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A1P00352 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A1P00352 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ALDH1A1P00352 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A1P00352 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A1P00352 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms