Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.29□□□□□ -0.12
Hcn1O88704 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hcn1O88704 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hcn1O88704 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hcn1O88704 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.29□□□□□ -0.12
Hcn1O88704 Grk6-207ENSMUST00000225925 2769 ntBASIC14.28□□□□□ -0.12
Hcn1O88704 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Hcn1O88704 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.28□□□□□ -0.12
Hcn1O88704 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.28□□□□□ -0.12
Hcn1O88704 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.28□□□□□ -0.12
Hcn1O88704 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Gm27628-201ENSMUST00000184911 107 ntBASIC14.28□□□□□ -0.12
Hcn1O88704 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.28□□□□□ -0.12
Hcn1O88704 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.28□□□□□ -0.12
Hcn1O88704 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.28□□□□□ -0.12
Hcn1O88704 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hcn1O88704 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn1O88704 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
Hcn1O88704 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hcn1O88704 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.27□□□□□ -0.12
Hcn1O88704 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.27□□□□□ -0.12
Hcn1O88704 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn1O88704 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Hcn1O88704 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn1O88704 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn1O88704 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn1O88704 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.27□□□□□ -0.13
Hcn1O88704 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Hcn1O88704 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn1O88704 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.27□□□□□ -0.13
Hcn1O88704 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn1O88704 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn1O88704 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.27□□□□□ -0.13
Hcn1O88704 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hcn1O88704 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn1O88704 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.27□□□□□ -0.13
Hcn1O88704 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn1O88704 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.27□□□□□ -0.13
Hcn1O88704 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hcn1O88704 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hcn1O88704 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn1O88704 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.26□□□□□ -0.13
Hcn1O88704 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.26□□□□□ -0.13
Hcn1O88704 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.26□□□□□ -0.13
Hcn1O88704 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hcn1O88704 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hcn1O88704 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hcn1O88704 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hcn1O88704 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hcn1O88704 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hcn1O88704 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn1O88704 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms