Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
SncaO55042 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SncaO55042 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
SncaO55042 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
SncaO55042 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SncaO55042 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.34□□□□□ -0.43
SncaO55042 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.34□□□□□ -0.43
SncaO55042 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SncaO55042 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.34□□□□□ -0.43
SncaO55042 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SncaO55042 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SncaO55042 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Gm8097-201ENSMUST00000117903 829 ntBASIC12.34□□□□□ -0.43
SncaO55042 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.34□□□□□ -0.43
SncaO55042 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SncaO55042 Gm8318-201ENSMUST00000182954 872 ntBASIC12.34□□□□□ -0.43
SncaO55042 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.34□□□□□ -0.43
SncaO55042 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.34□□□□□ -0.43
SncaO55042 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.34□□□□□ -0.43
SncaO55042 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.34□□□□□ -0.43
SncaO55042 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.34□□□□□ -0.43
SncaO55042 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SncaO55042 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SncaO55042 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SncaO55042 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SncaO55042 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SncaO55042 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SncaO55042 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.33□□□□□ -0.44
SncaO55042 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SncaO55042 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.33□□□□□ -0.44
SncaO55042 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Gm12895-201ENSMUST00000122214 226 ntBASIC12.33□□□□□ -0.44
SncaO55042 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.33□□□□□ -0.44
SncaO55042 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SncaO55042 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.33□□□□□ -0.44
SncaO55042 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SncaO55042 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SncaO55042 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.33□□□□□ -0.44
SncaO55042 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.33□□□□□ -0.44
SncaO55042 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.33□□□□□ -0.44
SncaO55042 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms