Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Npc1O35604 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.54□□□□□ -0.08
Npc1O35604 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Npc1O35604 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.53□□□□□ -0.08
Npc1O35604 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.53□□□□□ -0.08
Npc1O35604 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.53□□□□□ -0.08
Npc1O35604 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.53□□□□□ -0.08
Npc1O35604 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.53□□□□□ -0.08
Npc1O35604 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.53□□□□□ -0.08
Npc1O35604 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.53□□□□□ -0.08
Npc1O35604 Gm14822-201ENSMUST00000122247 291 ntBASIC14.53□□□□□ -0.08
Npc1O35604 Mir1895-201ENSMUST00000122615 79 ntBASIC14.53□□□□□ -0.08
Npc1O35604 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.53□□□□□ -0.08
Npc1O35604 Gm17968-201ENSMUST00000194902 784 ntBASIC14.53□□□□□ -0.08
Npc1O35604 Gm45612-201ENSMUST00000211320 160 ntBASIC14.53□□□□□ -0.08
Npc1O35604 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Npc1O35604 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Npc1O35604 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Npc1O35604 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npc1O35604 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Npc1O35604 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npc1O35604 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npc1O35604 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.52□□□□□ -0.08
Npc1O35604 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.52□□□□□ -0.08
Npc1O35604 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Npc1O35604 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Npc1O35604 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npc1O35604 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npc1O35604 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Npc1O35604 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npc1O35604 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npc1O35604 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.52□□□□□ -0.09
Npc1O35604 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.52□□□□□ -0.09
Npc1O35604 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.52□□□□□ -0.09
Npc1O35604 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.52□□□□□ -0.09
Npc1O35604 Gm45747-201ENSMUST00000212203 999 ntBASIC14.52□□□□□ -0.09
Npc1O35604 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npc1O35604 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npc1O35604 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npc1O35604 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npc1O35604 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npc1O35604 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npc1O35604 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npc1O35604 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Npc1O35604 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npc1O35604 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Npc1O35604 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npc1O35604 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.51□□□□□ -0.09
Npc1O35604 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Npc1O35604 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Npc1O35604 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.51□□□□□ -0.09
Npc1O35604 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.51□□□□□ -0.09
Npc1O35604 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Npc1O35604 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Gm4995-201ENSMUST00000117247 432 ntBASIC14.51□□□□□ -0.09
Npc1O35604 Gm11025-201ENSMUST00000140773 466 ntBASIC14.51□□□□□ -0.09
Npc1O35604 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.51□□□□□ -0.09
Npc1O35604 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Efs-202ENSMUST00000227037 2540 ntBASIC14.51□□□□□ -0.09
Npc1O35604 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.51□□□□□ -0.09
Npc1O35604 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npc1O35604 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Npc1O35604 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.51□□□□□ -0.09
Npc1O35604 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Npc1O35604 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Npc1O35604 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms