Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Tcof1O08784 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tcof1O08784 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tcof1O08784 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tcof1O08784 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tcof1O08784 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
Tcof1O08784 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
Tcof1O08784 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Tcof1O08784 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.39■□□□□ 0.37
Tcof1O08784 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Tcof1O08784 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tcof1O08784 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.39■□□□□ 0.37
Tcof1O08784 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.39■□□□□ 0.37
Tcof1O08784 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.39■□□□□ 0.37
Tcof1O08784 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.39■□□□□ 0.37
Tcof1O08784 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.39■□□□□ 0.37
Tcof1O08784 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Tcof1O08784 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcof1O08784 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Tcof1O08784 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Efs-202ENSMUST00000227037 2540 ntBASIC17.38■□□□□ 0.37
Tcof1O08784 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.38■□□□□ 0.37
Tcof1O08784 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.38■□□□□ 0.37
Tcof1O08784 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tcof1O08784 Gm43474-201ENSMUST00000196415 774 ntBASIC17.38■□□□□ 0.37
Tcof1O08784 Gm43125-201ENSMUST00000201724 730 ntBASIC17.38■□□□□ 0.37
Tcof1O08784 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tcof1O08784 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tcof1O08784 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Tcof1O08784 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Tcof1O08784 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcof1O08784 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.37■□□□□ 0.37
Tcof1O08784 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tcof1O08784 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.37■□□□□ 0.37
Tcof1O08784 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.37■□□□□ 0.37
Tcof1O08784 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Mir6956-201ENSMUST00000183598 62 ntBASIC17.37■□□□□ 0.37
Tcof1O08784 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.37■□□□□ 0.37
Tcof1O08784 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tcof1O08784 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.37■□□□□ 0.37
Tcof1O08784 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.37■□□□□ 0.37
Tcof1O08784 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Tcof1O08784 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tcof1O08784 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.36■□□□□ 0.37
Tcof1O08784 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms